The input to MEME contains the following fields.
Default Numbers of Sites for each Motif | ||
---|---|---|
type of distribution | minimum sites | maximum sites |
one occurrence per sequence | n | n |
zero or one occurrence per sequence | sqrt(n) | n |
any number of repetitions per sequence | sqrt(n) | min(5*n, 50) |
Clicking on the Start search button causes your sequences to be sent to San Diego Supercomputer Center (SDSC) and analyzed by MEME for repeated patterns.
The results of the MEME analysis are sent to you by e-mail.
No copies of your sequences or analysis results are saved at SDSC after the results have been sent to you.