MEME - Introduction
THE MEME SYSTEM
Multiple EM for Motif Elicitation
The MEME system allows you to
motifs (highly conserved regions) in groups of related DNA or protein sequences using
sequence databases using motifs using
The MEME system was developed by
UCSD Computer Science and Engineering
department with input from
the San Diego Supercomputer Center
MEME is described in detail in the
You can see
sample MEME output
sample MAST output
Differences between the current release of the MEME system and earlier releases are described in the
You can download the
ANSI C source code
for the MEME system.
combines motif models from MEME into a hidden Markov model framework for use in searching sequence databases.
MEME and MAST are copyrighted software and can be
for commercial use.