Differential hybridization of amplified HpaII frangments between prostate cancer cell lines 
(PC3, PC3M, PC3M-Pro4, PC3M-LN4, and LNCaP) and immortalized prostate epithelial lines (RWPE-1, 267B1 and MIcsv40)
M = increased methylation, decreased copy number, or loss of a restriction site in the cancer line.
U = increased methylation, decreased copy number, or loss of a restriction site in the immortalized line.
* = differential hybridization may be due to copy number changes
contains   PC3     PC3M     PC3M-Pro4     PC3M-LN4     LNCaP  
Refseq ID Gene Symbol CpG island chr RWPE-1 267B1 Mlcsv40 RWPE-1 267B1 Mlcsv40 RWPE-1 267B1 Mlcsv40 RWPE-1 267B1 Mlcsv40 RWPE-1 267B1 Mlcsv40 Gene Description
NM_024915 FLJ13782 1 8 U* M M M M* M* M* U hypothetical protein FLJ13782
NM_015855 WIT-1 1 11 M M M M M M M M M U Wilms tumor associated protein
NM_014350 GG2-1 1 5 M M M M M* M TNF-induced protein
NM_000905 NPY 1 7 U* M* M M M M M M neuropeptide Y
NM_006142 SFN 1 1 U U M U M U M M stratifin
NM_000208 INSR 1 19 M M M M M insulin receptor
NM_021025 TLX3 1 5 M M M* M M M M M M M M T-cell leukemia, homeobox 3
NM_003206 TCF21 1 6 M M M M M M M M M U transcription factor 21
NM_138551 TSLP 1 5 M M M M M M M M M M M M M thymic stromal lymphopoietin
NM_024501 HOXD1 1 2 M M M M M M M M M M M M M homeo box D1
NM_003118 SPARC 0 5 M M M M M M M M M M M secreted protein, acidic, cysteine-rich (osteonectin)
NM_052860 ZNF300 1 5 M zinc finger protein 300
NM_001482 GATM 1 15 M M M M M M glycine amidinotransferase (L-arginine:glycine amidinotransferase)
NM_017902 HIF1AN 0 10 M* M* M* M M hypoxia-inducible factor 1, alpha subunit inhibitor
NM_017790 RGS3 0 9 M M M M regulator of G-protein signalling 3 isoform 3
NM_001538 HSF4 1 16 M M M M M M M heat shock transcription factor 4
NM_005593 MYF5 1 12 M M M M M M M myogenic factor 5
NM_007105 SLC22A1LS 0 11 M M solute carrier family 22 (organic cation transporter), member 1-like antisense
NM_024331 C20orf121 1 20 M M* M M M chromosome 20 open reading frame 121
NM_003529 HIST1H3A 1 6 M M M M M M* M* M* H3 histone family, member A
NM_004419 DUSP5 1 10 M M M dual specificity phosphatase 5
NM_005599 NHLH2 1 1 M M nescient helix loop helix 2
NM_018294 FLJ10998 1 10 M M M* M hypothetical protein FLJ10998
NM_020796 SEMA6A 1 5 M M M M M M M M* semaphorin 6A1
NM_025002 FLJ13162 1 6 M M M M hypothetical protein FLJ13162
NM_145285 NKX2-3 1 10 M* M NK2 transcription factor related, locus 3 (Drosophila)
NM_020168 PAK6 1 15 M M M* p21-activated protein kinase 6
NM_022755 C9orf12 1 9 M M* M* chromosome 9 open reading frame 12
NM_017824 FLJ20445 1 10 M M* hypothetical protein FLJ20445
NM_183401 RNF14 1 5 M* ring finger protein 14
NM_017614 BHMT2 1 5 M* M* betaine-homocysteine methyltransferase 2
NM_001790 CDC25C 1 5 M* cell division cycle 25C protein, isoform a
NM_052841 STK22C 1 1 M serine/threonine kinase 22C (spermiogenesis associated)
NM_031437 RASSF5 1 1 U Ras association (RalGDS/AF-6) domain family 5
NM_003222 TFAP2C 1 20 M* M* transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
NM_004878 PTGES 0 9 M M M prostaglandin E synthase
NM_000043 TNFRSF6 1 10 M M M* M tumor necrosis factor receptor superfamily, member 6 isoform 1 precursor
NM_032783 FLJ14431 1 4 M* hypothetical protein FLJ14431
NM_003177 SYK 1 9 M* spleen tyrosine kinase
NM_014003 DHX38 1 16 M M pre-mRNA splicing factor Prp16
NM_003791 MBTPS1 1 16 M M site-1 protease preproprotein
NM_004125 GNG10 1 9 M guanine nucleotide binding protein (G protein), gamma 10
NM_020121 UGCGL2 1 13 M M* UDP-glucose:glycoprotein glucosyltransferase 2
NM_030971 BA108L7.2 1 10 M* M* M similar to rat tricarboxylate carrier-like protein
NM_000138 FBN1 1 15 M M M* M* M M M fibrillin 1
NM_018197 ZFP64 1 20 M M* M* M M* M* M* zinc finger protein 64
NM_002052 GATA4 1 8 M M M M M M M GATA binding protein 4
NM_025264 C2orf8 1 2 M M hypothetical protein MGC2454
NM_080652 MGC15397 1 3 M M M similar to RIKEN cDNA 5730578N08 gene
NM_005165 ALDOC 0 17 U aldolase C, fructose-bisphosphate
NM_144503 F11R 1 1 M M M M M M junctional adhesion molecule 1 isoform a precursor
NM_006898 HOXD3 1 2 M M M M M M M M M homeo box D3
NM_016733 LIMK2 0 22 M M M M M LIM domain kinase 2 isoform 2b
NM_006871 RIPK3 1 14 M M receptor-interacting serine-threonine kinase 3
NM_014080 DUOX2 1 15 M M M M M M M M dual oxidase 2
NM_052918 SORCS1 1 10 M* M* M M M M sortilin-related VPS10 domain containing receptor 1
NM_002110 HCK 1 20 M* M* M* M* M* M* M M* M* M* M* hemopoietic cell kinase
NM_000441 SLC26A4 1 7 M M M M M M M M M pendrin
NM_004817 TJP2 1 9 M M M* M M M* M M tight junction protein 2 (zona occludens 2)
NM_021828 HPSE2 0 10 M M* M M M* heparanase 2
NM_003780 B4GALT2 0 1 M M M UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 isoform b
NM_001374 DNASE1L2 1 16 M M M M M deoxyribonuclease I-like 2
NM_021154 PSAT1 1 9 M M phosphoserine aminotransferase isoform 2
NM_002202 ISL1 1 5 M M M* M M islet-1
NM_002084 GPX3 1 5 M M* M M M* plasma glutathione peroxidase 3 precursor
NM_004523 KIF11 1 10 M M M M M M* kinesin family member 11
NM_012449 STEAP 1 7 M M M M M M M six transmembrane epithelial antigen of the prostate
NM_033028 BBS4 1 15 M M* M M M M M M Bardet-Biedl syndrome 4
NM_004647 DPF1 1 19 M M Neuro-d4 (rat) homolog
NM_000125 ESR1 1 6 M estrogen receptor 1
NM_005732 RAD50 1 5 M M* M M M M M M RAD50 homolog isoform 1
NM_021967 SERF1A 1 5 M* M* small EDRK-rich factor 1A (telomeric)
NM_022145 FKSG14 1 5 M* M* M* M* M* M* leucine zipper protein FKSG14
NM_133338 RAD17 1 5 M* M* M* M* RAD17 homolog isoform 1
NM_133342 RAD17 1 5 M* M* M* M* RAD17 homolog isoform 1
NM_153713 MGC46719 1 1 M M M M hypothetical protein MGC46719
NM_003308 TSPY 1 Y M* M* M* M* M* M* M* M* U* testis specific protein, Y-linked
NM_022573 TSPYQ1 0 Y M* M* M* M* M* M* M* M* U* testis specific protein, Y-linked 2
NM_002467 MYC 1 8 U* U* U U U U U U* U* U* U* v-myc myelocytomatosis viral oncogene homolog
NM_018071 FLJ10357 0 14 U U U U U hypothetical protein FLJ10357
NM_002578 PAK3 0 X U U U U* U* U* U U* U* p21-activated kinase 3
NM_004535 MYT1 0 20 U U U U myelin transcription factor 1
NM_015460 MYRIP 1 3 U* U U U U* U U* U M myosin VIIA and Rab interacting protein
NM_005362 MAGEA3 1 X U U U U U U melanoma antigen, family A, 3
NM_032804 FLJ14547 1 10 U U* U* U U U U* U* U U* U* hypothetical protein FLJ14547
NM_003762 VAMP4 1 1 U U U U U U U U U U U vesicle-associated membrane protein 4
NM_030759 NRBF-2 1 10 U U* U* nuclear receptor binding factor-2
NM_014951 ZNF365 1 10 U U* U* U U U* U* U U* U* KIAA0844 protein
NM_002658 PLAU 1 10 U U U* U U U U U* U* U U U* plasminogen activator, urokinase
NM_007055 RPC155 1 10 U U U U U U U U U M* M* M* polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
NM_005822 DSCR1L1 0 6 M M* Down syndrome critical region gene 1-like 1 protein
NM_018649 H2AFY2 1 10 U* U U U* M core histone macroH2A2.2
NM_003242 TGFBR2 1 3 U* M M M transforming growth factor, beta receptor II (70/80kDa)
NM_021614 KCNN2 1 5 U U U small conductance calcium-activated potassium channel protein 2 isoform a
NM_003591 CUL2 1 10 U U U cullin 2
NM_017444 CHRAC1 1 8 U* U* U* chromatin accessibility complex 1
NM_018444 PPM2C 1 8 U* U* U* pyruvate dehydrogenase phosphatase
NM_001642 APLP2 1 11 U* U* U* amyloid beta (A4) precursor-like protein 2
NM_016077 CGI-147 1 17 U CGI-147 protein
NM_022831 FLJ12806 1 1 U U U hypothetical protein FLJ12806
NM_018186 FLJ10706 1 1 U U U hypothetical protein FLJ10706
NM_016026 RDH11 0 14 U* U* U* androgen-regulated short-chain dehydrogenase/reductase 1
NM_006019 TCIRG1 1 11 U U U T-cell, immune regulator 1, isoform a
NM_006888 CALM1 1 14 U U calmodulin 1 (phosphorylase kinase, delta)
NM_003744 NUMB 1 14 U U* U* numb homolog
NM_006255 PRKCH 1 14 U* U* U* protein kinase C, eta
NM_004702 CCNE2 1 8 U* U* cyclin E2 isoform 3
NM_021052 HIST1H2AE 1 6 M* H2A histone family, member A
NM_138635 H2AV 1 7 U histone H2A.F/Z variant isoform 2
NM_004282 BAG2 1 6 M* M* BCL2-associated athanogene 2
NM_021064 HIST1H2AG 1 6 M* H2A histone family, member P
NM_019014 POLR1B 1 2 M M similar to DNA-directed RNA polymerase I (135 kDa)
NM_013324 CISH 1 3 U U cytokine-inducible SH2-containing protein isoform 1
NM_144695 FLJ32421 1 1 U hypothetical protein FLJ32421
NM_016023 CGI-77 1 8 U* U* CGI-77 protein
NM_007057 ZWINT 1 10 U* U* ZW10 interactor
NM_002290 LAMA4 1 6 U U U laminin, alpha 4 precursor
NM_016249 MAGEE1 0 X U U U* melanoma antigen, family E, 1, cancer/testis specific
NM_001607 ACAA1 1 3 U* acetyl-Coenzyme A acyltransferase 1
NM_022461 AZ2 1 3 U* hypothetical protein FLJ21939 similar to 5-azacytidine induced gene 2
NM_025010 KIAA0795 1 3 U* hypothetical protein FLJ13703
NM_003666 BLZF1 0 1 U basic leucine zipper nuclear factor 1 (JEM-1)
NM_013374 PDCD6IP 1 3 U* programmed cell death 6 interacting protein
NM_006840 LILRB5 0 19 U U U U U leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5
NM_003373 VCL 1 10 U U U U vinculin isoform VCL
NM_000486 AQP2 0 12 U U U* aquaporin 2
NM_004693 K6HF 0 12 U U U* U U U cytokeratin type II
NM_020634 GDF3 0 12 U U U growth differentiation factor 3 precursor
NM_002644 PIGR 0 1 U U U polymeric immunoglobulin receptor
NM_000497 CYP11B1 0 8 U* U* U U cytochrome P450, family 11, subfamily B, polypeptide 1
NM_002814 PSMD10 1 X U U* proteasome 26S non-ATPase subunit 10 isoform 1
NM_001674 ATF3 1 1 U U U activating transcription factor 3 long isoform
NM_021029 RPL36A 1 X U U U ribosomal protein L36a
NM_018972 GDAP1 1 8 U* ganglioside-induced differentiation-associated protein 1
NM_000858 GUK1 1 1 U U U U guanylate kinase 1
NM_004024 ATF3 1 1 U U U activating transcription factor 3 delta Zip isoform
NM_018099 FLJ10462 0 12 U U hypothetical protein FLJ10462
NM_000124 ERCC6 1 10 U excision repair cross-complementing rodent repair deficiency, complementation group 6
NM_001123 ADK 1 10 U U U adenosine kinase isoform a
NM_007265 HSGT1 1 10 U U U* U* U U* suppressor of S. cerevisiae gcr2
NM_005329 HAS3 1 16 U U hyaluronan synthase 3
NM_023032 METTL1 1 12 U U methyltransferase-like protein 1 isoform b
NM_023033 METTL1 1 12 U U U methyltransferase-like protein 1 isoform c
NM_021222 HTCD37 1 1 M M TcD37 homolog
NM_001452 FOXF2 1 6 U U U forkhead box F2
NM_000641 IL11 0 19 M M U U interleukin 11 precursor
NM_014213 HOXD9 1 2 U homeo box D9
NM_005557 KRT16 0 17 U U keratin 16
NM_004314 ART1 0 11 U ADP-ribosyltransferase 1
NM_004681 EIF1AY 1 Y M M* eukaryotic translation initiation factor 1A, Y chromosome
NM_016124 RHD 0 1 U U U U Rh blood group D antigen isoform 1
NM_021193 HOXD12 1 2 U homeo box D12
NM_020314 MGC16824 1 16 U esophageal cancer associated protein
NM_003307 TRPM2 0 21 U transient receptor potential cation channel, subfamily M, member 2
NM_005432 XRCC3 1 14 U X-ray repair cross complementing protein 3
NM_015250 BICD2 1 9 U* coiled-coil protein BICD2
NM_006783 GJB6 0 13 U* gap junction protein, beta 6 (connexin 30)
NM_139209 GPRK7 1 3 U U U G protein-coupled receptor kinase 7
NM_004264 SURB7 1 12 U SRB7 suppressor of RNA polymerase B homolog
NM_000224 KRT18 1 12 U U U keratin 18
NM_006106 YAP1 1 11 U U Yes-associated protein 1, 65 kD
NM_152879 DGKD 0 2 U diacylglycerol kinase, delta 130kDa isoform 2
NM_145254 LOC124491 1 16 U LOC124491
NM_153259 MCOLN2 1 1 U mucolipin 2
NM_005940 MMP11 1 22 U matrix metalloproteinase 11 preproprotein
NM_014409 TAF5L 1 1 U PCAF associated factor 65 beta
NM_080605 B3GALT6 0 1 U U UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
NM_024012 HTR5A 1 7 U U 5-hydroxytryptamine (serotonin) receptor 5A
NM_021106 RGS3 0 9 U U regulator of G-protein signalling 3 isoform 2
NM_001327 CTAG1 0 X U U U U U U U U U cancer/testis antigen 1
NM_020177 FEM1C 0 5 U U U U* feminization 1 homolog a
NM_025228 DJ434O14.3 0 1 U U U U U U hypothetical protein dJ434O14.3
NM_004679 VCY 0 Y U* U U U* U U* U* U U variable charge, Y chromosome
NM_017745 BCOR 1 X U U U BCL-6 interacting corepressor isoform 1
NM_014345 ZNF318 1 6 U U U endocrine regulator
NM_005597 NFIC 1 19 U U U nuclear factor I/C (CCAAT-binding transcription factor)
NM_006206 PDGFRA 1 4 U U platelet-derived growth factor receptor alpha precursor
NM_015686 TED 1 X U U TED protein
NM_001772 CD33 0 19 U CD33 antigen (gp67)
NM_018968 SNTG2 0 2_random U syntrophin, gamma 2
NM_015120 ALMS1 1 2 U U ALMS1
NM_000276 OCRL 1 X U phosphatidylinositol polyphosphate 5-phosphatase isoform a
NM_001587 OCRL 1 X U U U U phosphatidylinositol polyphosphate 5-phosphotase isoform b
NM_144488 RGS3 0 9 U U regulator of G-protein signalling 3 isoform 6
NM_138455 CTHRC1 1 8 U* U U U* U* U* U collagen triple helix repeat containing 1
NM_005554 KRT6A 0 12 U U keratin 6A
NM_014865 CNAP1 1 12 M M U M chromosome condensation-related SMC-associated protein 1
NM_002447 MST1R 1 3 U U U M macrophage stimulating 1 receptor (c-met-related tyrosine kinase)
NM_032312 MGC11061 1 2 U hypothetical protein MGC11061
NM_000760 CSF3R 0 1 U U U U colony stimulating factor 3 receptor isoform a precursor
NM_001715 BLK 0 8 U B lymphoid tyrosine kinase
NM_000061 BTK 0 X U U Bruton agammaglobulinemia tyrosine kinase
NM_005555 KRT6B 0 12 U U keratin 6B
NM_139073 TSARG1 0 2 U U U U U spermatogenesis associated 3
NM_000728 CALCB 1 11 U U calcitonin-related polypeptide, beta
NM_016323 CEB1 1 4 U cyclin-E binding protein 1
NM_002952 RPS2 1 16 U U U ribosomal protein S2
NM_024090 ELOVL6 1 4 U long-chain fatty-acyl elongase
NM_017877 FLJ20555 1 2 U hypothetical protein FLJ20555
NM_014353 RAB26 1 16 U RAB26, member RAS oncogene family
NM_032960 MAPKAPK2 1 1 U mitogen-activated protein kinase-activated protein kinase 2 isoform 2
NM_018958 C15orf2 1 15 U* chromosome 15 open reading frame 2
NM_003332 TYROBP 0 19 U U U TYRO protein tyrosine kinase binding protein
NM_016478 NIPA 1 7 U nuclear interacting partner of anaplastic lymphoma kinase (ALK)
NM_007110 TEP1 1 14 U telomerase-associated protein 1
NM_003043 SLC6A6 0 3 U U solute carrier family 6 (neurotransmitter transporter, taurine), member 6
NM_002162 ICAM3 0 19 U U U intercellular adhesion molecule 3 precursor
NM_002762 PRM2 1 16 U U U protamine 2
NM_007155 ZP3 0 7 U zona pellucida glycoprotein 3 (sperm receptor)
NM_003636 KCNAB2 1 1 M U U potassium voltage-gated channel, shaker-related subfamily, beta member 2 isoform 1
NM_014621 HOXD4 1 2 M homeo box D4
NM_000964 RARA 0 17 U retinoic acid receptor, alpha
NM_015277 NEDD4L 1 18 M* U* ubiquitin-protein ligase NEDD4-like
NM_000657 BCL2 1 18 M* B-cell lymphoma protein 2 beta
NM_052861 MGC21675 1 4 M hypothetical protein MGC21675
NM_005203 COL13A1 1 10 U* U* M* alpha 1 type XIII collagen isoform 1
NM_019616 F7 0 13 U* M coagulation factor VII precursor isoform b
NM_017918 FLJ20647 1 4 U hypothetical protein FLJ20647
NM_000585 IL15 1 4 U* U U* interleukin 15 isoform 1 precursor
NM_003601 SMARCA5 1 4 U U U* M SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5
NM_004362 CLGN 1 4 U U* calmegin
NM_000788 DCK 1 4 U U deoxycytidine kinase
NM_007292 ACOX1 1 17 U U* acyl-Coenzyme A oxidase isoform b
NM_002129 HMGB2 1 4 U* U* high-mobility group box 2
NM_003878 GGH 1 8 U* gamma-glutamyl hydrolase precursor
NM_003631 PARG 1 10 U poly (ADP-ribose) glycohydrolase
NM_018089 FLJ10415 1 2 U U hypothetical protein FLJ10415
NM_000543 SMPD1 1 11 U sphingomyelin phosphodiesterase 1, acid lysosomal (acid sphingom
NM_021184 C6orf47 0 6 U G4 protein
NM_007254 PNKP 1 19 U U U polynucleotide kinase 3'-phosphatase
NM_018396 METTL2 1 7 U putative methyltransferase
NM_004907 ETR101 1 19 U immediate early protein
NM_007067 MYST2 1 17 U U U histone acetyltransferase
NM_004187 SMCX 1 X U Smcx homolog, X chromosome
NM_016114 ASB1 1 2 U U U ankyrin repeat and SOCS box-containing protein 1
NM_005637 SS18 1 18 U* U synovial sarcoma, translocated to X chromosome
NM_016406 HSPC155 0 1 U U hypothetical protein HSPC155
NM_006212 PFKFB2 1 1 U U U 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
NM_000938 POLR2B 1 4 U U U* U DNA directed RNA polymerase II polypeptide B
NM_004337 C8orf1 1 8 U* U* U U* chromosome 8 open reading frame 1
NM_002485 NBS1 1 8 U* U* nibrin
NM_014109 PRO2000 1 8 U* U* U* PRO2000 protein
NM_024094 MGC5528 1 8 U* U* U* hypothetical protein MGC5528
NM_019069 WDR5B 0 3 U U U U WD repeat domain 5B
NM_005081 ZNF142 1 2 U U zinc finger protein 142 (clone pHZ-49)
NM_020806 GPHN 1 14 U* U* U* gephyrin
NM_001530 HIF1A 1 14 U* U* U* hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
NM_006544 SEC10L1 1 14 U* U* U* brain secretory protein SEC10P
NM_031866 FZD8 0 10 U U U frizzled homolog 8 (Drosophila)
NM_012320 LYPLA3 1 16 U lysophospholipase 3 (lysosomal phospholipase A2)
NM_016551 TM7SF3 1 12 U U U M seven transmembrane protein TM7SF3
NM_032795 FLJ14494 1 11 U* hypothetical protein FLJ14494
NM_007086 AND-1 1 14 U* U* AND-1 protein
NM_014039 PTD012 1 11 U PTD012 protein
NM_001786 CDC2 1 10 U* U* cell division cycle 2 protein isoform 1
NM_005387 NUP98 1 11 U nucleoporin 98kD isoform 3
NM_006328 RBM14 1 11 U RNA binding motif protein 14
NM_003478 CUL5 1 11 U* Vasopressin-activated calcium-mobilizing receptor-1
NM_032118 FLJ12953 1 2 U U hypothetical protein FLJ12953 similar to Mus musculus D3Mm3e
NM_003201 TFAM 1 10 U* U* U* transcription factor A, mitochondrial
NM_024604 FLJ21908 1 12 U hypothetical protein FLJ21908
NM_006338 GAC1 1 1 U U glioma amplified on chromosome 1 protein (leucine-rich)
NM_004260 RECQL4 1 8 U RecQ protein-like 4
NM_012482 ZNF281 1 1 U U zinc finger protein 281
NM_007276 CBX3 1 7 U U* U chromobox homolog 3
NM_004398 DDX10 1 11 U* DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 10
NM_005613 RGS4 0 1 U regulator of G-protein signaling 4
NM_014002 IKBKE 0 1 U IKK-related kinase epsilon
NM_030813 SKD3 1 11 U suppressor of potassium transport defect 3
NM_003936 CDK5R2 1 2 U cyclin-dependent kinase 5, regulatory subunit 2 (p39)
NM_021144 PSIP2 1 9 U PC4 and SFRS1 interacting protein 1
NM_145258 MGC22773 1 1 U hypothetical protein MGC22773
NM_017769 FLJ20333 1 14 U KIAA1333
NM_030631 SLC25A21 1 14 U U solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21
NM_003582 DYRK3 1 1 U U U dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3
NM_145117 NAV2 1 11 U neuron navigator 2 isoform L
NM_004328 BCS1L 1 2 U BCS1-like
NM_020247 CABC1 1 1 U U chaperone, ABC1 activity of bc1 complex like
NM_001087 AAMP 1 2 U angio-associated, migratory cell protein
NM_015488 MR-1 1 2 U U U U myofibrillogenesis regulator 1
NM_000447 PSEN2 1 1 U U presenilin 2 isoform 1
NM_006706 TCERG1 1 5 U transcription elongation regulator 1
NM_006704 SUGT1 1 13 M SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
NM_015132 SNX13 1 7 U* U sorting nexin 13
NM_024728 C7orf10 1 7 U chromosome 7 open reading frame 10
NM_001912 CTSL 1 9 U cathepsin L preproprotein
NM_145918 CTSL 1 9 U cathepsin L preproprotein
NM_024035 MGC3113 0 8 U* U U hypothetical protein MGC3113
NM_004195 TNFRSF18 1 1 U tumor necrosis factor receptor superfamily, member 18
NM_148901 TNFRSF18 1 1 U U U U tumor necrosis factor receptor superfamily, member 18
NM_003999 OSMR 1 5 M M M M oncostatin M receptor
NM_024558 C14orf138 1 14 M M M hypothetical protein FLJ13920
NM_003445 ZNF155 0 19 M M M M zinc finger protein 155 (pHZ-96)
NM_022771 FLJ12085 1 12 U M M M hypothetical protein FLJ12085
NM_004172 SLC1A3 0 5 M M M M M solute carrier family 1 (glial high affinity glutamate transporter), member 3
NM_012382 OSRF 1 5 M* M M M osmosis responsive factor
NM_005983 SKP2 1 5 M M M M S-phase kinase-associated protein 2 isoform 1
NM_032637 SKP2 1 5 M M M M S-phase kinase-associated protein 2 isoform 2
NM_032933 MGC11386 0 18 U* U hypothetical protein MGC11386
NM_013978 BNIP1 0 5 U BCL2/adenovirus E1B 19kD interacting protein 1 isoform BNIP1-a
NM_006168 NKX6-1 1 4 M U* NK6 transcription factor related, locus 1
NM_080683 PTPN13 1 4 U* protein tyrosine phosphatase, non-receptor type 13 isoform 1
NM_004433 ELF3 0 1 M M E74-like factor 3 (ets domain transcription factor, epithelial-specific )
NM_000347 SPTB 1 14 M spectrin, beta, erythrocytic (includes spherocytosis, clinical type I)
NM_018951 HOXA10 1 7 U* U U homeobox protein A10 isoform a
NM_002501 NFIX 1 19 U U U U nuclear factor I/X (CCAAT-binding transcription factor)
NM_004642 CDK2AP1 1 12 U M M M M M M CDK2-associated protein 1
NM_014586 HUNK 1 21 U M M M hormonally upregulated Neu-associated kinase
NM_014644 PDE4DIP 0 1 U M M M M phosphodiesterase 4D interacting protein (myomegalin)
NM_007173 SPUVE 1 11 M M M M M protease, serine, 23 precursor
NM_022492 FLJ12788 1 2 M M M hypothetical protein FLJ12788
NM_000389 CDKN1A 1 6 M M M cyclin-dependent kinase inhibitor 1A
NM_001924 GADD45A 1 1 M M M growth arrest and DNA-damage-inducible, alpha
NM_024963 FLJ11467 1 7 U hypothetical protein FLJ11467
NM_013248 NXT1 1 20 U NTF2-related export protein 1
NM_052865 C20orf72 1 20 M* M* chromosome 20 open reading frame 72
NM_014660 PHF14 1 7 M* M M* M KIAA0783 gene product
NM_017410 HOXC13 1 12 M M* homeo box C13
NM_000082 CKN1 1 5 M* M* M M* M M Cockayne syndrome 1 protein
NM_002451 MTAP 1 9 M M M M 5'-methylthioadenosine phosphorylase
NM_003525 HIST1H2BI 1 6 M* M* H2B histone family, member K
NM_002165 ID1 1 20 M* M* M* M* inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
NM_003640 IKBKAP 1 9 M M inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
NM_006020 ALKBH 1 14 M M M alkB, alkylation repair homolog
NM_002486 NCBP1 1 9 M* nuclear cap binding protein subunit 1, 80kDa
NM_005184 CALM3 1 19 M M calmodulin 3 (phosphorylase kinase, delta)
NM_002874 RAD23B 1 9 M M UV excision repair protein RAD23 homolog B
NM_000227 LAMA3 0 18 U* laminin alpha 3 subunit precursor
NM_003930 SCAP2 1 7 U* src family associated phosphoprotein 2
NM_016265 ZNF325 1 7 U* M* GIOT-3 for gonadotropin inducible transcription repressor-3
NM_012153 EHF 0 11 U ets homologous factor isoform b
NM_000790 DDC 0 7 M M dopa decarboxylase (aromatic L-amino acid decarboxylase)
NM_130470 MADD 1 11 M MAP-kinase activating death domain-containing protein, isoform a
NM_003001 SDHC 1 1 U U succinate dehydrogenase complex, subunit C precursor
NM_003775 EDG6 1 19 U U endothelial differentiation, G protein coupled receptor 6 precursor
NM_012385 P8 0 16 U U U p8 protein (candidate of metastasis 1)
NM_000882 IL12A 1 3 U interleukin 12A precursor
NM_004165 RRAD 1 16 U U U Ras-related associated with diabetes
NM_147129 FLJ36525 1 3 U hypothetical protein LOC259173
NM_003120 SPI1 1 11 U spleen focus forming virus (SFFV) proviral integration oncogene spi1
NM_000417 IL2RA 0 10 U interleukin 2 receptor, alpha chain precursor
NM_016113 TRPV2 0 17 U transient receptor potential cation channel, subfamily V, member 2
NM_032128 DKFZP566M114 1 4 M M M Homo sapiens hypothetical protein DKFZp566M114 (DKFZP566M114)
NM_007285 GABARAPL2 1 16 M M M GABA(A) receptor-associated protein-like 2
NM_022041 GAN 1 16 M M M gigaxonin
NM_001839 CNN3 1 1 M M M calponin 3
NM_014324 AMACR 1 5 M alpha-methylacyl-CoA racemase
NM_017761 FLJ20312 1 1_random M M M hypothetical protein FLJ20312
NM_138284 IL17D 1 13 M M* M* M* interleukin 17D
NM_004875 POLR1C 1 6 M M M RNA polymerase I subunit
NM_006479 PIR51 1 12 M M M M M RAD51-interacting protein
NM_005996 TBX3 1 12 M M M M M T-box 3 protein isoform 1
NM_032380 EFG2 1 5 M* M* mitochondrial elongation factor G2
NM_006041 HS3ST3B1 1 17 M heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3B1
NM_002749 MAPK7 1 17 M mitogen-activated protein kinase 7 isoform 1
NM_006169 NNMT 0 11 M* M M nicotinamide N-methyltransferase
NM_018064 C6orf166 1 6 M* M* hypothetical protein FLJ10342
NM_005548 KARS 1 16 M lysyl-tRNA synthetase
NM_138343 KNSL8 1 6 M kinesin-like 8
NM_024979 MCF2L 1 13 M MCF.2 cell line derived transforming sequence-like
NM_024010 MTRR 1 5 M methionine synthase reductase isoform 2
NM_032087 PCDHGA7 1 5 M protocadherin gamma subfamily A, 1
NM_000965 RARB 0 3 M retinoic acid receptor, beta isoform 1
NM_002033 FUT4 1 11 U* M fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
NM_000177 GSN 1 9 U gelsolin (amyloidosis, Finnish type)
NM_032872 JFC1 0 1 U synaptotagmin-like 1
NM_004659 MMP23A 1 1 U matrix metalloproteinase 23A
NM_182649 PCNA 1 20 U proliferating cell nuclear antigen
NM_001116 ADCY9 0 16 M adenylate cyclase 9
NM_024758 AGMAT 1 1 U agmatine ureohydrolase (agmatinase)
NM_006092 CARD4 1 7 M caspase recruitment domain family, member 4
NM_003818 CDS2 1 20 U phosphatidate cytidylyltransferase 2
NM_024668 FLJ20288 1 5 M M FLJ20288 protein
NM_004899 BRE 1 2 M brain and reproductive organ-expressed (TNFRSF1A modulator)
NM_001902 CTH 1 1 M cystathionase isoform 1
NM_004048 B2M 1 15 M beta-2-microglobulin
NM_021824 NIF3L1 0 2 M NIF3 NGG1 interacting factor 3-like 1
NM_004888 ATP6V1G1 1 9 M M ATPase, H+ transporting, lysosomal, V1 subunit G isoform 1
NM_002946 RPA2 1 1 M M replication protein A2, 32kDa
NM_014229 SLC6A11 1 3 U solute carrier family 6 (neurotransmitter transporter, GABA), member 11
NM_001516 GTF2H3 1 12 M general transcription factor IIH, polypeptide 3, 34kDa
NM_002097 GTF3A 1 13 M general transcription factor IIIA
NM_144706 MGC29762 1 2 M chromosome 2 open reading frame 15
NM_006158 NEFL 1 8 M M neurofilament, light polypeptide 68kDa
NM_006194 PAX9 1 14 M paired box gene 9
NM_012243 SLC35A3 1 1 M solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3
NM_014174 THY28 1 11 M HSPC144 protein
NM_017779 FLJ20354 1 1 M M M hypothetical protein FLJ20354
NM_032673 NSPC1 1 2 M M hypothetical protein MGC10882
NM_006086 TUBB4 1 16 M tubulin, beta, 4
NM_005211 CSF1R 0 5 M M M M M colony stimulating factor 1 receptor precursor
NM_003532 HIST1H3E 1 6 M M* M M M M M M M* M* M* H3 histone family, member D
NM_153038 FLJ32447 1 2 M M hypothetical protein FLJ32447
NM_003740 KCNK5 1 6 M M M M potassium channel, subfamily K, member 5
NM_005098 MSC 1 8 M M musculin (activated B-cell factor-1)
NM_005806 OLIG2 1 21 M* oligodendrocyte lineage transcription factor 2
NM_003542 HIST1H4C 1 6 M* M* H4 histone family, member G
NM_022164 LCN7 0 1 M M M M P3ECSL
NM_006021 DLEU2 1 13 M M deleted in lymphocytic leukemia, 2
NM_000926 PGR 1 11 M progesterone receptor
NM_004472 FOXD1 0 5 M* M M* forkhead box D1
NM_024296 MGC1203 1 1 M hypothetical protein MGC1203
NM_145805 ISL2 1 15 M M M M ISL2 transcription factor, LIM/homeodomain, (islet-2)
NM_004330 BNIP2 1 15 M BCL2/adenovirus E1B 19kD interacting protein 2
NM_002757 MAP2K5 1 15 M* mitogen-activated protein kinase kinase 5 isoform B
NM_018163 FLJ10634 1 15 M M M hypothetical protein FLJ10634
NM_000985 RPL17 1 18 M M M ribosomal protein L17
NM_014978 SORCS3 1 10 M VPS10 domain receptor protein SORCS 3
NM_004701 CCNB2 1 15 M M M* M M M M M M cyclin B2
NM_014262 LEPREL2 1 12 M M M M M B protein
NM_183001 SHC1 0 1 M M M SHC (Src homology 2 domain containing) transforming protein 1
NM_000546 TP53 1 17 M M M M M tumor protein p53
NM_004730 ETF1 1 5 M eukaryotic translation termination factor 1
NM_002082 GPRK6 1 5 U M G protein-coupled receptor kinase 6
NM_002520 NPM1 1 5 U M M nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NM_003291 TPP2 1 13 M tripeptidyl peptidase II
NM_000024 ADRB2 1 5 M adrenergic, beta-2-, receptor, surface
NM_004627 WRB 1 21 U* tryptophan rich basic protein
NM_006732 FOSB 1 19 M M FBJ murine osteosarcoma viral oncogene homolog B
NM_014335 CRI1 1 15 M* M M CREBBP/EP300 inhibitory protein 1
NM_004663 RAB11A 1 15 M* M* M* RAB11A, member RAS oncogene family
NM_003524 HIST1H2BH 1 6 M* M* H2B histone family, member J
NM_006547 IMP-3 1 7 M IGF-II mRNA-binding protein 3
NM_020158 RRP46 1 19 M* M M M exosome component Rrp46
NM_004596 SNRPA 1 19 M small nuclear ribonucleoprotein polypeptide A
NM_021833 UCP1 1 4 M uncoupling protein 1
NM_000610 CD44 1 11 M CD44 antigen (homing function and Indian blood group system)
NM_001262 CDKN2C 1 1 M M cyclin-dependent kinase inhibitor 2C
NM_006892 DNMT3B 1 20 M* M* DNA (cytosine-5-)-methyltransferase 3 beta
NM_005469 PTE1 0 20 M* peroxisomal acyl-CoA thioesterase
NM_002827 PTPN1 1 20 M* M* protein tyrosine phosphatase, non-receptor type 1
NM_013375 ABT1 1 6 M M* M* activator of basal transcription 1
NM_021968 HIST1H4J 1 6 M M* M* M* histone 1, H4j
NM_021063 HIST1H2BD 0 6 M* H2B histone family, member B
NM_015966 SDBCAG84 1 20 M* serologically defined breast cancer antigen 84
NM_006282 STK4 1 20 M* M* M* serine/threonine kinase 4
NM_016359 ANKT 1 15 M M clone HQ0310 PRO0310p1
NM_024045 DDX50 1 10 M* nucleolar protein GU2
NM_003714 STC2 1 5 M M M stanniocalcin 2
NM_003358 UGCG 1 9 M ceramide glucosyltransferase
NM_024813 FLJ13150 1 1 M hypothetical protein FLJ13150
NM_052886 MAL2 1 8 M mal, T-cell differentiation protein 2
NM_030634 ZNF436 1 1 M zinc finger protein 436
NM_053034 ANTXR1 1 2 M tumor endothelial marker 8 isoform 2 precursor
NM_000269 NME1 1 17 M non-metastatic cells 1 protein
NM_018304 FLJ11029 1 17 M M hypothetical protein FLJ11029
NM_002194 INPP1 1 2 M M inositol polyphosphate-1-phosphatase
NM_014917 KIAA0976 1 1 M M M netrin G1f
NM_003188 MAP3K7 1 6 M* M* M* mitogen-activated protein kinase kinase kinase 7 isoform A
NM_145331 MAP3K7 1 6 M* M* M* mitogen-activated protein kinase kinase kinase 7 isoform B
NM_053001 OSR2 1 8 M* M M odd-skipped-related 2A protein
NM_004181 UCHL1 1 4 M ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
NM_018268 FLJ10904 1 5 M M* M* hypothetical protein FLJ10904
NM_014318 APR-2 0 17 M M apoptosis related protein
NM_019854 HRMT1L3 1 12 M M HMT1 hnRNP methyltransferase-like 3
NM_018164 FLJ10637 1 12 M hypothetical protein FLJ10637
NM_007306 BRCA1 1 17 M M breast cancer 1, early onset isoform BRCA1-exon4
NM_004644 AP3B2 1 15 M adaptor-related protein complex 3, beta 2 subunit
NM_020726 NLN 1 5 M neurolysin (metallopeptidase M3 family)
NM_000959 PTGFR 1 1 M prostaglandin F receptor (FP)
NM_002584 PAX7 1 1 M paired box gene 7 isoform 1
NM_014581 OBP2B 0 9 M odorant-binding protein 2B
NM_001063 TF 1 3 M M transferrin
NM_013372 CKTSF1B1 1 15 M cysteine knot superfamily 1, BMP antagonist 1
NM_007296 BRCA1 1 17 M breast cancer 1, early onset
NM_002913 RFC1 1 4 M replication factor C large subunit
NM_003440 ZNF140 1 12 M M* M M zinc finger protein 140 (clone pHZ-39)
NM_002700 POU4F3 1 5 M* M M POU domain, class 4, transcription factor 3
NM_000633 BCL2 1 18 M* M M M M B-cell lymphoma protein 2 alpha
NM_000602 SERPINE1 0 7 M M M serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
NM_005509 DMXL1 1 5 M M M M M M M* Dmx-like 1
NM_144977 MGC27044 1 1 M family with sequence similarity 31, member B
NM_005170 ASCL2 1 11 M achaete-scute complex homolog-like 2
NM_014829 DDX46 1 5 M M M Prp5-like DEAD-box protein
NM_133344 RAD17 1 5 M* M* RAD17 homolog isoform 1
NM_004675 ARHI 1 1 M M M M U ras homolog I
NM_006557 DMRT2 1 9 M M M M doublesex and mab-3 related transcription factor 2
NM_002760 PRKY 1 Y M* M* protein kinase, Y-linked
NM_006815 RNP24 1 12 M coated vesicle membrane protein
NM_130898 AIBZIP 1 1 M M M M cAMP responsive element binding protein 3-like 4
NM_006571 DCTN6 1 8 M* M M novel RGD-containing protein
NM_000451 SHOX 1 Y M* M* short stature homeobox isoform a
NM_001008 RPS4Y 0 Y M* M* M* M M M* M M* M M* M* ribosomal protein S4, Y-linked Y isoform
NM_005880 DNAJA2 1 16 M M M M M M M DnaJ subfamily A member 2
NM_014012 REM 1 20 M M M* M* M* M* RAS (RAD and GEM)-like GTP-binding
NM_001929 DGUOK 1 2 M deoxyguanosine kinase isoform c precursor
NM_080916 DGUOK 1 2 M M M M deoxyguanosine kinase isoform a precursor
NM_014690 KIAA0773 0 7 U U KIAA0773 gene product
NM_153031 FLJ32063 1 2 U hypothetical protein FLJ32063
NM_020387 RAB25 0 1 M M U RAB25
NM_033304 ADRA1A 1 8 M M M M alpha-1A-adrenergic receptor isoform 4
NM_144971 MGC26641 1 Y M M Homo sapiens hypothetical protein MGC26641 (MGC26641)
NM_003531 HIST1H3C 1 6 M M M* H3 histone family, member C
NM_172316 MEIS2 0 15 M M M* homeobox protein Meis2 isoform h
NM_016154 RAB4B 1 19 M M M M ras-related GTP-binding protein 4b
NM_003672 CDC14A 1 1 M M M CDC14 homolog A isoform 1
NM_005109 OSR1 1 3 M M oxidative-stress responsive 1
NM_006739 MCM5 1 22 M M M minichromosome maintenance deficient protein 5
NM_006254 PRKCD 1 3 M protein kinase C, delta
NM_003639 IKBKG 1 X U M inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
NM_032166 TREX1 1 3 M M three prime repair exonuclease 1 isoform c
NM_003107 SOX4 0 6 M M M* SRY (sex determining region Y)-box 4
NM_014322 OPN3 1 1 M M opsin 3 (encephalopsin, panopsin)
NM_033627 TREX1 1 3 M M M M M three prime repair exonuclease 1 isoform b